BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037G03SP1|AL430429
(878 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig732 956 0.0
3x_Contig900 762 0.0
>3x_Contig732
Length = 3019
Score = 956 bits (482), Expect = 0.0
Identities = 492/494 (99%), Gaps = 1/494 (0%)
Strand = Plus / Plus
Query: 385 ccttgagtagatgctctcaaagacgtagcgaaaccgaacattgtgttcaatggacattca 444
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 15 ccttgagtagatgctctcaaaaacgtagcgaaaccgaacattgtgttcaatggacattca 74
Query: 445 gcagtgatggtgaactcgtcttgaccattttcagtatcttgaatgacagcttgcaacttg 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 gcagtgatggtgaactcgtcttgaccattttcagtatcttgaatgacagcttgcaacttg 134
Query: 505 ttcatcaaaccgatgacgttaccttggaattcgtttggagaagtgacagagacgttcatg 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 ttcatcaaaccgatgacgttaccttggaattcgtttggagaagtgacagagacgttcatg 194
Query: 565 attggttccaagatgactggttgagattccaaaaatgcttggcggaatgcggccatagta 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 attggttccaagatgactggttgagattccaaaaatgcttggcggaatgcggccatagta 254
Query: 625 gcggttttgaaggccaattcgttggaatcaacagcatgaatagcaccatcgttgattaac 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gcggttttgaaggccaattcgttggaatcaacagcatgaatagcaccatcgttgattaac 314
Query: 685 atattaacaccgagcactctgtggccaattaatggacccttttcacaggcttcttcgaat 744
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 315 atattaacaccgagcactctgtggccaattaatggaccctttt-acaggcttcttcgaat 373
Query: 745 cccttggcacaggcagctaaatacttatccggaatacgaccaccaacgatagcagtttca 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 cccttggcacaggcagctaaatacttatccggaatacgaccaccaacgatagcagtttca 433
Query: 805 aagttgttggtattggaattttcaatatgagacaaattacccataactctaccgtattga 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 aagttgttggtattggaattttcaatatgagacaaattacccataactctaccgtattga 493
Query: 865 ccagcaccacctga 878
||||||||||||||
Sbjct: 494 ccagcaccacctga 507
>3x_Contig900
Length = 3046
Score = 762 bits (384), Expect = 0.0
Identities = 406/410 (99%), Gaps = 3/410 (0%)
Strand = Plus / Minus
Query: 8 gggacagcctgtcatgggccccaaaattaatgatcttttagataagataaacagtgatga 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gggacagcctgtcatgggccccaaaattaatgatcttttagataagataaacagtgatga 349
Query: 68 gacttacaccaggtagaggcattcgtgcatttttgataaaaacagcctttcatcatttct 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gacttacaccaggtagaggcattcgtgcatttttgataaaaacagcctttcatcatttct 289
Query: 128 gaatattttctcttcgtatacttcatttctaaccattgaattaaattatagaacaagata 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 gaatattttctcttcgtatacttcatttctaaccattgaattaaattatagaacaagata 229
Query: 188 gtaattatttacaaggtatttggcgatagtttttcttttataatatataaacaagcactt 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 gtaattatttacaaggtatttggcgatagtttttcttttataatatataaacaagcactt 169
Query: 248 ttttaaattatatcttttattggggaatcatgttatcatttctgttgttgcttcttttga 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 ttttaaattatatcttttattggggaatcatgttatcatttctgttgttgcttcttttga 109
Query: 308 tagtccgcaatcaattgcttttgtagctgtggcgaa-stggcgcatagtgcttgaattcc 366
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 108 tagtccgcaatcaattgcttttgtagctgtggcgaagctggcgcatagtgcttgaattcc 49
Query: 367 aacgagaattcacctttaccttgagtagatgctctcaaagacgtagcgaa 416
||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 -acgagaa-tcacctttaccttgagtagatgctctcaaagacgtagcgaa 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7506
Number of Sequences: 1807
Number of extensions: 7506
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 2
length of query: 878
length of database: 10,358,551
effective HSP length: 16
effective length of query: 862
effective length of database: 10,329,639
effective search space: 8904148818
effective search space used: 8904148818
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)